MDB - MELIOIDOSIS DATABASE

  Protein search results for - S5P9U1

Names and origin
Entry : S5P9U1 (unreviewed)
Entry name : S5P9U1_BURPE
Protein names : Ribonuclease E (RNase E) (EC 3.1.26.12)
Organism : Burkholderia pseudomallei MSHR305
Organism ID : 1335307
Gene names : rne
ORF names : BDL_2989
EC number : 3.1.26.12
History
Date of creation : 2013-10-16
Date of modification : 2014-09-03
Date of sequence modification : 2013-10-16
Protein attributes
Protein existence : Inferred from homology
Gene Ontology (GO)
GO term name : RNA binding; cytoplasm; cytoplasmic side of plasma membrane; endoribonuclease activity; mRNA catabolic process; magnesium ion binding; rRNA processing; ribonuclease E activity; tRNA processing; zinc ion binding
GO identifier : GO:0003723; GO:0005737; GO:0009898; GO:0004521; GO:0006402; GO:0000287; GO:0006364; GO:0008995; GO:0008033; GO:0008270
Keywords
Ligand & Biological process : Cell inner membrane; Cell membrane; Complete proteome; Cytoplasm; Endonuclease; Hydrolase; Magnesium; Membrane; Metal-binding; Nuclease; RNA-binding; Zinc; rRNA processing; tRNA processing
General annotation
Domains : S1 motif domain (1)
Sequence similarities : Belongs to RNase E/G family, RNase E subfamily
Subcellular location : Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side.
Reference
PubMed ID : 23969058
Protein sequence
Length : 1138 residues
>S5P9U1|S5P9U1_BURPE Burkholderia pseudomallei MSHR305
MLFNATQQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGVVTRIEPSLEACFVNYGED
RHGFLPFKEVARQYFKEGVDMRSARIQDALREGQELIVQVEKEERGNKGAALTTFISLAG
RYLVLMPNNPRGGGVSRRIEGDERQELRETMAQLQIPDGMSMIARTAGIGRSAEELQWDL
NYLLQLWRAIEAASQSGHPGQPMLIYLESSLVIRAIRDYFQPDIGEILIDTTEIHDQARA
FMDIVMPDNVGKVKRYHDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVAID
VNSARATKGADIEETATRTNLEAADEVARQLRLRDLGGLIVIDFIDMESAKSQREVEQRL
KDALKHDRARVQMGKISRFGLMELSRQRLRPALSEGSHVTCPRCNGTGHIRDTESSALQV
LRIIQEEAMKENTAAIHCQVPVEVTAFLLNEKRQEINKIESRFKVGVVLIPNKHLDTPHY
KLERLRHDDARLDDPRASWKMAEEAARELEAETGYSKRAEETKPRQEAAVKGITPERPAP
SPAPQRQSAPEAAAPVAAAPASGGGFMKWLKGLFGAQPAAVPAPAPAAQETAARPARERA
ERGERGEKAERGERGGDRNRHRRGGAAQQAGGRDQAAAGGGRAQAPRAEREGKETREPRE
GREARGGRDNREGREARETREAREPREQREPREVREQREARERAETVDAAEAPRGERRER
GERRKPAPHVATLETVNRGESAHAETAEKPLYAPGAEAGVDADSNARDGEERRRRRRGRR
GGRREREDEVAGAVQAAEGSEGVTAEAEALEHAEHAQQRVAPVANQAPEHAAQAGAGVAA
AAAATVAAEAIAHVESGAKVEPQPAAEASAGDTEQAEAVPARSIEAPAQAASTGQAEAVQ
AAPAAPAHVTPATADVAREPAAPAETASAETTPAEIPPAEAAPAEAPAAEASEVAASAVA
SAPAAAAEPAPAETDAAREPASVAEPHVPAAAAPPTPASVATTPGASLDTALAAAGLVWV
NTDTDKLRAAQAAAAQIVQPVRVPRERKPLPPVDATPMQQVETTHR